Ian's DNA@Leeds

SAMPLE

Shadow Autozygosity MaPping by Linkage Exclusion

The current version of SAMPLE is listed on the top row of the table below. The documentation (HTML user guide) can be found here.

SAMPLE is currently tested only on Windows XP SP2/3 and Vista SP1. The .NET framework 2.0 must be installed. (Available through Windows Update or the Microsoft Download Centre.) No installation is required: simply run the SAMPLE program from the directory into which it is extracted.

Please mail Ian Carr with queries or comments on SAMPLE.

Also available for download is a bundle of sample genotype files (*.xls) (132Mb), which are used for the examples given in the online guide. These files were annotated by the program SNPannotator, using the genotype files created by Affymetrix Genotyping Console.

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Other software by category:

Genetic mapping

Software for genetic mapping using SNP arrays

eDNA data analysis

Programs and scripts for a environmental samples anlysis workflow.

Sequence analysis

Programs for sequencing and electropherogram analysis

Next Generation Sequencing

Programs for next generation sequence analysis.

Other software

Programs for performing miscellaneous data manipulation tasks

© Dr Ian Carr
Last modified: Wed, 15th Apr 2020, at 10:53 pm